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» Using ontologies for simulation integration
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NAR
2006
91views more  NAR 2006»
13 years 8 months ago
YOGY: a web-based, integrated database to retrieve protein orthologs and associated Gene Ontology terms
We present YOGY a web-based resource for orthologous proteins from nine eukaryotic organisms: Homo sapiens, Mus musculus, Rattus norvegicus, Arabidopsis thaliana, Drosophila melan...
Christopher J. Penkett, James A. Morris, Valerie W...
ICFEM
2005
Springer
14 years 2 months ago
Visualizing and Simulating Semantic Web Services Ontologies
The development of Web Services has transformed the World Wide Web into a more application-aware information portal. The various standards ensure that Web Services are interpretabl...
Jun Sun 0001, Yuan-Fang Li, Hai H. Wang, Jing Sun
SUM
2007
Springer
14 years 2 months ago
Combining Uncertain Outputs from Multiple Ontology Matchers
Abstract. An ontology matching method (or a matcher) aims at matching every entity (or concept) in one ontology to the most suitable entity (or entities) in another ontology. Usual...
Ying Wang, Weiru Liu, David A. Bell
WS
2010
ACM
13 years 7 months ago
Anomalies in ontologies with rules
For the development of practical semantic applications, ontologies are commonly used with rule extensions. Prominent examples of semantic applications are Semantic Wikis, Semantic...
Joachim Baumeister, Dietmar Seipel
BMCBI
2006
85views more  BMCBI 2006»
13 years 8 months ago
Quality control for terms and definitions in ontologies and taxonomies
Background: Ontologies and taxonomies are among the most important computational resources for molecular biology and bioinformatics. A series of recent papers has shown that the G...
Jacob Köhler, Katherine Munn, Alexander R&uum...