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» Using probabilistic model checking in systems biology
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FORMATS
2003
Springer
14 years 28 days ago
Performance Analysis of Probabilistic Timed Automata Using Digital Clocks
Probabilistic timed automata, a variant of timed automata extended with discrete probability distributions, is a specification formalism suitable for describing both nondeterminis...
Marta Z. Kwiatkowska, Gethin Norman, David Parker,...
ICFEM
2009
Springer
14 years 2 months ago
Approximate Model Checking of PCTL Involving Unbounded Path Properties
Abstract. We study the problem of applying statistical methods for approximate model checking of probabilistic systems against properties encoded as PCTL formulas. Such approximate...
Samik Basu, Arka P. Ghosh, Ru He
HYBRID
2007
Springer
14 years 1 months ago
Model Checking Genetic Regulatory Networks with Parameter Uncertainty
The lack of precise numerical information for the values of biological parameters severely limits the development and analysis of models of genetic regulatory networks. To deal wit...
Grégory Batt, Calin Belta, Ron Weiss
JIB
2007
95views more  JIB 2007»
13 years 7 months ago
Integration of constraints documented in SBML, SBO, and the SBML Manual facilitates validation of biological models
The creation of quantitative, simulatable, Systems Biology Markup Language (SBML) models that accurately simulate the system under study is a time-intensive manual process that re...
Allyson L. Lister, Matthew R. Pocock, Anil Wipat
CONCUR
2009
Springer
14 years 2 months ago
Counterexamples in Probabilistic LTL Model Checking for Markov Chains
We propose how to present and compute a counterexample in probabilistic LTL model checking for discrete-time Markov chains. In qualitative probabilistic model checking, we present ...
Matthias Schmalz, Daniele Varacca, Hagen Völz...