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» Using probabilistic model checking in systems biology
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AB
2007
Springer
14 years 1 months ago
Algorithmic Algebraic Model Checking IV: Characterization of Metabolic Networks
A series of papers, all under the title of Algorithmic Algebraic Model Checking (AAMC), has sought to combine techniques from algorithmic algebra, model checking and dynamical syst...
Venkatesh Mysore, Bud Mishra
SIGSOFT
2009
ACM
14 years 8 months ago
Probabilistic environments in the quantitative analysis of (non-probabilistic) behaviour models
System specifications have long been expressed through automata-based languages, enabling verification techniques such as model checking. These verification techniques can assess ...
Esteban Pavese, Sebastián Uchitel, Ví...
RECOMB
2002
Springer
14 years 8 months ago
Probabilistic hierarchical clustering for biological data
Biological data, such as gene expression profiles or protein sequences, is often organized in a hierarchy of classes, where the instances assigned to "nearby" classes in...
Eran Segal, Daphne Koller
FMSD
2010
118views more  FMSD 2010»
13 years 6 months ago
On simulation-based probabilistic model checking of mixed-analog circuits
In this paper, we consider verifying properties of mixed-signal circuits, i.e., circuits for which there is an interaction between analog (continuous) and digital (discrete) values...
Edmund M. Clarke, Alexandre Donzé, Axel Leg...
BMCBI
2010
104views more  BMCBI 2010»
13 years 7 months ago
Formal reasoning on qualitative models of coinfection of HIV and Tuberculosis and HAART therapy
Background: Several diseases, many of which nowadays pandemic, consist of multifactorial pathologies. Paradigmatic examples come from the immune response to pathogens, in which ca...
Anil Sorathiya, Andrea Bracciali, Pietro Liò...