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» Using probabilistic model checking in systems biology
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SAC
2010
ACM
15 years 4 months ago
Data-aware design and verification of service compositions with Reo and mCRL2
Service-based systems can be modeled as stand-alone services coordinated by external connectors. Reo is a channelbased coordination language with well-defined semantics that enabl...
Natallia Kokash, Christian Krause, Erik P. de Vink
148
Voted
SAC
2009
ACM
15 years 11 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
178
Voted
SIGSOFT
2006
ACM
15 years 10 months ago
Bit level types for high level reasoning
Bitwise operations are commonly used in low-level systems code to access multiple data fields that have been packed into a single word. Program analysis tools that reason about s...
Ranjit Jhala, Rupak Majumdar
ARC
2007
Springer
140views Hardware» more  ARC 2007»
15 years 8 months ago
Reconfigurable Computing for Accelerating Protein Folding Simulations
Abstract. This paper presents a methodology for the design of a reconfigurable computing system applied to a complex problem in molecular Biology: the protein folding problem. An e...
Nilton B. Armstrong, Heitor S. Lopes, Carlos R. Er...
WCE
2007
15 years 5 months ago
Dynamic Behaviour and Significance of Neuron Networks with Varying Degrees of Random Coupling
—Networks of coupled dynamical systems exhibit many interesting behaviours such as spatio-temporal chaos, pattern formation and synchronization. Such networks can be used to mode...
Bijilash Babu, Marissa Condon