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BIBM
2008
IEEE
110views Bioinformatics» more  BIBM 2008»
14 years 1 months ago
Genome Alignments Using MPI-LAGAN
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
Ruinan Zhang, Huzefa Rangwala, George Karypis
IPPS
2002
IEEE
14 years 10 days ago
Reliable Communication in Faulty Star Networks
‘ We take advantage of the hierarchical structure of the star graph network to obtain an efficient method for constructing node-disjoint paths between arbitrary pairs of nodes in...
Khaled Day, Abdel Elah Al-Ayyoub
HPDC
1998
IEEE
13 years 11 months ago
Efficient Coupling of Parallel Applications Using PAWS
PAWS (Parallel Application WorkSpace) is a software infrastructure for use in connecting separate parallel applications within a component-like model. A central PAWS Controller co...
Peter H. Beckman, Patricia K. Fasel, William F. Hu...
SAC
2000
ACM
13 years 11 months ago
Parallel C++ for the Java Virtual Machine
Object-oriented modeling and design is a way of solving problems using models based upon real-world concepts. In this paradigm, the fundamental construct is the object, an entity ...
Timothy E. Denehy, Chang-Hyun Jo
VECPAR
2000
Springer
13 years 11 months ago
A SCOOPP Evaluation on Packing Parallel Objects in Run-Time
The SCOOPP (Scalable Object Oriented Parallel Programming) system is an hybrid compile and run-time system. SCOOPP dynamically scales OO applications on a wide range of target plat...
João Luís Sobral, Alberto José...