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AVI
2010
13 years 8 months ago
Wakame: sense making of multi-dimensional spatial-temporal data
As our ability to measure the world around us improves, we are quickly generating massive quantities of high-dimensional, spatial-temporal data. In this paper, we concern ourselve...
Clifton Forlines, Kent Wittenburg
EON
2003
13 years 8 months ago
Racer: A Core Inference Engine for the Semantic Web
In this paper we describe Racer, which can be considered as a core inference engine for the semantic web. The Racer inference server offers two APIs that are already used by at le...
Volker Haarslev, Ralf Möller
BMCBI
2010
214views more  BMCBI 2010»
13 years 7 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
BMCBI
2010
233views more  BMCBI 2010»
13 years 7 months ago
Odefy -- From discrete to continuous models
Background: Phenomenological information about regulatory interactions is frequently available and can be readily converted to Boolean models. Fully quantitative models, on the ot...
Jan Krumsiek, Sebastian Pölsterl, Dominik M. ...