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» Visual and algorithmic tooling for system trace analysis: a ...
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BMCBI
2006
155views more  BMCBI 2006»
13 years 7 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
ICSE
2001
IEEE-ACM
13 years 12 months ago
Encoding Program Executions
Dynamic analysis is based on collecting data as the program runs. However, raw traces tend to be too voluminous and too unstructured to be used directly for visualization and unde...
Steven P. Reiss, Manos Renieris
BMCBI
2008
131views more  BMCBI 2008»
13 years 7 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
ICSM
2002
IEEE
14 years 13 days ago
Static and Dynamic C++ Code Analysis for the Recovery of the Object Diagram
When a software system enters the maintenance phase, the availability of accurate and consistent information about its organization can help alleviate the difficulties of program...
Paolo Tonella, Alessandra Potrich
LCPC
2009
Springer
14 years 2 days ago
A Balanced Approach to Application Performance Tuning
Abstract. Current hardware trends place increasing pressure on programmers and tools to optimize scientific code. Numerous tools and techniques exist, but no single tool is a pana...
Souad Koliai, Stéphane Zuckerman, Emmanuel ...