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» Visual data mining and analysis of software repositories
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ISVC
2010
Springer
13 years 7 months ago
Visual Network Analysis of Dynamic Metabolic Pathways
We extend our previous work on the exploration of static metabolic networks to evolving, and therefore dynamic, pathways. We apply our visualization software to data from a simulat...
Markus Rohrschneider, Alexander Ullrich, Andreas K...
SCFBM
2008
148views more  SCFBM 2008»
13 years 8 months ago
Flow: Statistics, visualization and informatics for flow cytometry
Flow is an open source software application for clinical and experimental researchers to perform exploratory data analysis, clustering and annotation of flow cytometric data. Flow...
Jacob Frelinger, Thomas B. Kepler, Cliburn Chan
BMCBI
2010
108views more  BMCBI 2010»
13 years 8 months ago
iGTP: A software package for large-scale gene tree parsimony analysis
Background: The ever-increasing wealth of genomic sequence information provides an unprecedented opportunity for large-scale phylogenetic analysis. However, species phylogeny infe...
Ruchi Chaudhary, Mukul S. Bansal, André Weh...
BMCBI
2005
124views more  BMCBI 2005»
13 years 8 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
CORR
2010
Springer
155views Education» more  CORR 2010»
13 years 9 months ago
Towards Performance Measurement And Metrics Based Analysis of PLA Applications
This article is about a measurement analysis based approach to help software practitioners in managing the additional level complexities and variabilities in software product line...
Zeeshan Ahmed