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» Visual software tools for bioinformatics
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BIBE
2007
IEEE
149views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
Michael L. Blinov, Ion I. Moraru
BMCBI
2010
232views more  BMCBI 2010»
13 years 7 months ago
LucidDraw: Efficiently visualizing complex biochemical networks within MATLAB
Background: Biochemical networks play an essential role in systems biology. Rapidly growing network data and e research activities call for convenient visualization tools to aid i...
Sheng He, Juan Mei, Guiyang Shi, Zhengxiang Wang, ...
CSB
2005
IEEE
166views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Automated Validation of Polymerase Chain Reactions Using Amplicon Melting Curves
PCR, the polymerase chain reaction, is a fundamental tool of molecular biology. Quantitative PCR is the goldstandard methodology for determination of DNA copy numbers, quantitatin...
Tobias P. Mann, Richard Humbert, John A. Stamatoya...
WCRE
2002
IEEE
14 years 19 days ago
Java Quality Assurance by Detecting Code Smells
Software inspection is a known technique for improving software quality. It involves carefully examining the code, the design, and the documentation of software and checking these...
Eva Van Emden, Leon Moonen
SCAM
2002
IEEE
14 years 19 days ago
Visualization of Exception Propagation for Java Using Static Analysis
In this paper, we first present a static analysis based on set-based framework, which estimates exception propagation paths of Java programs. We construct an exception propagatio...
Byeong-Mo Chang, Jang-Wu Jo, Soon Hee Her