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ISPD
2012
ACM
288views Hardware» more  ISPD 2012»
12 years 3 months ago
Construction of realistic gate sizing benchmarks with known optimal solutions
Gate sizing in VLSI design is a widely-used method for power or area recovery subject to timing constraints. Several previous works have proposed gate sizing heuristics for power ...
Andrew B. Kahng, Seokhyeong Kang
LREC
2010
156views Education» more  LREC 2010»
13 years 9 months ago
U-Compare: An Integrated Language Resource Evaluation Platform Including a Comprehensive UIMA Resource Library
Language resources, including corpus and tools, are normally required to be combined in order to achieve a user's specific task. However, resources tend to be developed indep...
Yoshinobu Kano, Ruben Dorado, Luke McCrohon, Sophi...
BMCBI
2010
144views more  BMCBI 2010»
13 years 7 months ago
Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
Background: The investigation of plant genome structure and evolution requires comprehensive characterization of repetitive sequences that make up the majority of higher plant nuc...
Petr Novák, Pavel Neumann, Jirí Maca...
BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
DOVIS: an implementation for high-throughput virtual screening using AutoDock
Background: Molecular-docking-based virtual screening is an important tool in drug discovery that is used to significantly reduce the number of possible chemical compounds to be i...
Shuxing Zhang, Kamal Kumar, Xiaohui Jiang, Anders ...
BMCBI
2008
106views more  BMCBI 2008»
13 years 7 months ago
SpliceCenter: A suite of web-based bioinformatic applications for evaluating the impact of alternative splicing on RT-PCR, RNAi,
Background: Over 60% of protein-coding genes in vertebrates express mRNAs that undergo alternative splicing. The resulting collection of transcript isoforms poses significant chal...
Michael C. Ryan, Barry Zeeberg, Natasha J. Caplen,...