The field of algorithms for pairwisc biosequence similarity search is dominated by heuristic methods of high efficiency but uncertain sensitivity. One reason that more formal stri...
Similarity-based grouping of data entries in one or more data sources is a task underlying many different data management tasks, such as, structuring search results, removal of red...
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
We propose an algorithm, MusicBLAST, for approximate pattern search/matching on symbolic musical data. MusicBLAST is based on the BLAST algorithm, one of the most commonly used al...
Background: Quantitative descriptions of amino acid similarity, expressed as probabilistic models of evolutionary interchangeability, are central to many mainstream bioinformatic ...
Blazej Bulka, Marie desJardins, Stephen J. Freelan...