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BMCBI
2006
195views more  BMCBI 2006»
13 years 10 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
AIIA
2007
Springer
14 years 4 months ago
Harvesting Relational and Structured Knowledge for Ontology Building in the WPro Architecture
We present two algorithms for supporting semi-automatic ontology building, integrated in WPro, a new architecture for ontology learning from Web documents. The first algorithm auto...
Daniele Bagni, Marco Cappella, Maria Teresa Pazien...
LPAR
2004
Springer
14 years 3 months ago
Knowledge-Based Synthesis of Distributed Systems Using Event Structures
Abstract. To produce a program guaranteed to satisfy a given specification one can synthesize it from a formal constructive proof that a computation satisfying that specification...
Mark Bickford, Robert L. Constable, Joseph Y. Halp...
RECOMB
2005
Springer
14 years 10 months ago
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
Tommy Kaplan, Nir Friedman, Hanah Margalit
CSB
2005
IEEE
117views Bioinformatics» more  CSB 2005»
14 years 3 months ago
Protein Structure Prediction Using Physical-Based Global Optimization and Knowledge-Guided Fragment Packing
We describe a new method to predict the tertiary structure of new-fold proteins. Our two-phase approach combines the knowledge-based fragmentpacking with the minimization of a phy...
Jinhui Ding, Elizabeth Eskow, Nelson L. Max, Silvi...