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SISAP
2008
IEEE
166views Data Mining» more  SISAP 2008»
14 years 4 months ago
Approximate Similarity Search in Genomic Sequence Databases Using Landmark-Guided Embedding
Similarity search in sequence databases is of paramount importance in bioinformatics research. As the size of the genomic databases increases, similarity search of proteins in the...
Ahmet Sacan, Ismail Hakki Toroslu
BMCBI
2010
101views more  BMCBI 2010»
13 years 9 months ago
Detection of copy number variation from array intensity and sequencing read depth using a stepwise Bayesian model
Background: Copy number variants (CNVs) have been demonstrated to occur at a high frequency and are now widely believed to make a significant contribution to the phenotypic variat...
Zhengdong D. Zhang, Mark B. Gerstein
JCP
2007
115views more  JCP 2007»
13 years 9 months ago
Toward The Use Of The Time-Warping Principle With Discrete-Time Sequences
Abstract—This paper establishes a new coherent framework to extend the class of unitary warping operators to the case of discrete–time sequences. Providing some a priori consid...
Arnaud Jarrot, Cornel Ioana, André Quinquis
ECSQARU
2007
Springer
14 years 3 months ago
Forward-Backward-Viterbi Procedures in the Transferable Belief Model for State Sequence Analysis Using Belief Functions
Abstract. The Transferable Belief Model (TBM) relies on belief functions and enables one to represent and combine a variety of knowledge from certain up to ignorance as well as con...
Emmanuel Ramasso, Michèle Rombaut, Denis Pe...
CSB
2003
IEEE
14 years 2 months ago
A New Approach for Gene Annotation Using Unambiguous Sequence Joining
The problem addressed by this paper is accurate and automatic gene annotation following precise identification/annotation of exon and intron boundaries of biologically verified ...
Alexandre Tchourbanov, Daniel Quest, Hesham H. Ali...