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JPDC
2007
167views more  JPDC 2007»
15 years 4 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
VLDB
2004
ACM
97views Database» more  VLDB 2004»
15 years 9 months ago
CHICAGO: A Test and Evaluation Environment for Coarse-Grained Optimization
Relational OLAP tools and other database applications generate sequences of SQL statements that are sent to the database server as result of a single information request issued by...
Tobias Kraft, Holger Schwarz
169
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SSIAI
2002
IEEE
15 years 9 months ago
Spatio-Temporal Motion Segmentation via Level Set Partial Differential Equations
Motion-based segmentation of image sequences is an important problem of image analysis, with numerous applications to image coding and image manipulation. We present a novel algor...
Abdol-Reza Mansouri, Amar Mitiche, Rosario El-Fegh...
BMCBI
2006
85views more  BMCBI 2006»
15 years 4 months ago
On single and multiple models of protein families for the detection of remote sequence relationships
Background: The detection of relationships between a protein sequence of unknown function and a sequence whose function has been characterised enables the transfer of functional a...
James A. Casbon, Mansoor A. S. Saqi
BMCBI
2008
128views more  BMCBI 2008»
15 years 4 months ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...