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COLING
2008
13 years 10 months ago
On the Weak Generative Capacity of Weighted Context-free Grammars
It is shown how weighted context-free grammars can be used to recognize languages beyond their weak generative capacity by a one-step constant time extension of standard recogniti...
Anders Søgaard
CSB
2003
IEEE
14 years 2 months ago
Genomic Sequence Analysis Using Gap Sequences and Pattern Filtering
A new pattern filtering technique is developed to analyze the genomic sequence in this research based on gap sequences, in which the distance of the same symbol is recorded consec...
Shih-Chieh Su, Chia H. Yeh, C. C. Jay Kuo
BMCBI
2008
172views more  BMCBI 2008»
13 years 9 months ago
Compo: composite motif discovery using discrete models
Background: Computational discovery of motifs in biomolecular sequences is an established field, with applications both in the discovery of functional sites in proteins and regula...
Geir Kjetil Sandve, Osman Abul, Finn Drablø...
BIBM
2008
IEEE
142views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Using Global Sequence Similarity to Enhance Biological Sequence Labeling
Identifying functionally important sites from biological sequences, formulated as a biological sequence labeling problem, has broad applications ranging from rational drug design ...
Cornelia Caragea, Jivko Sinapov, Drena Dobbs, Vasa...
COMCOM
1999
78views more  COMCOM 1999»
13 years 8 months ago
A complete test sequence using cyclic sequence for conformance testing
We present a problem of commonly used characterization sequences (CS) for the protocol conformance testing and propose a new test sequence to resolve the problem. The proposed tes...
DaeHun Nyang, S. Y. Lim, JooSeok Song