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» Weighted analysis of general microarray experiments
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BMCBI
2011
13 years 2 months ago
Appearance frequency modulated gene set enrichment testing
Background: Gene set enrichment testing has helped bridge the gap from an individual gene to a systems biology interpretation of microarray data. Although gene sets are defined a ...
Jun Ma, Maureen A. Sartor, H. V. Jagadish
APLAS
2008
ACM
13 years 9 months ago
Context-Sensitive Relevancy Analysis for Efficient Symbolic Execution
Abstract. Symbolic execution is a flexible and powerful, but computationally expensive technique to detect dynamic behaviors of a program. In this paper, we present a context-sensi...
Xin Li, Daryl Shannon, Indradeep Ghosh, Mizuhito O...
DAMON
2006
Springer
13 years 11 months ago
Using secure coprocessors for privacy preserving collaborative data mining and analysis
Secure coprocessors have traditionally been used as a keystone of a security subsystem, eliminating the need to protect the rest of the subsystem with physical security measures. ...
Bishwaranjan Bhattacharjee, Naoki Abe, Kenneth Gol...
BMCBI
2010
141views more  BMCBI 2010»
13 years 7 months ago
Computing and visually analyzing mutual information in molecular co-evolution
Background: Selective pressure in molecular evolution leads to uneven distributions of amino acids and nucleotides. In fact one observes correlations among such constituents due t...
Sebastian Bremm, Tobias Schreck, Patrick Boba, Ste...
BMCBI
2010
154views more  BMCBI 2010»
13 years 4 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...