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» Weighted analysis of general microarray experiments
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BMCBI
2006
123views more  BMCBI 2006»
13 years 11 months ago
How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different result
Background: Short oligonucleotide arrays for transcript profiling have been available for several years. Generally, raw data from these arrays are analysed with the aid of the Mic...
Frank F. Millenaar, John Okyere, Sean T. May, Mart...
BMCBI
2004
146views more  BMCBI 2004»
13 years 10 months ago
Multivariate search for differentially expressed gene combinations
Background: To identify differentially expressed genes, it is standard practice to test a twosample hypothesis for each gene with a proper adjustment for multiple testing. Such te...
Yuanhui Xiao, Robert D. Frisina, Alexander Gordon,...
BMCBI
2006
139views more  BMCBI 2006»
13 years 11 months ago
Integrated functional visualization of eukaryotic genomes
Background: Increasing amounts of data from large scale whole genome analysis efforts demands convenient tools for manipulation, visualization and investigation. Whole genome plot...
Rohit Ghai, Hannes Lindemann, Trinad Chakraborty
SIGIR
2005
ACM
14 years 4 months ago
Web-based acquisition of Japanese katakana variants
This paper describes a method of detecting Japanese Katakana variants from a large corpus. Katakana words, which are mainly used as loanwords, cause problems with information retr...
Takeshi Masuyama, Hiroshi Nakagawa
ICML
2004
IEEE
14 years 11 months ago
Distribution kernels based on moments of counts
Many applications in text and speech processing require the analysis of distributions of variable-length sequences. We recently introduced a general kernel framework, rational ker...
Corinna Cortes, Mehryar Mohri