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CISIS
2007
IEEE
13 years 8 months ago
Gridifying IBM's Generic Log Adapter to Speed-Up the Processing of Log Data
Problem determination in today's computing environments consumes between 30 and 70% of an organization’s IT resources and represents from one third to one half of their tot...
Claudi Paniagua, Fatos Xhafa, Thanasis Daradoumis
BMCBI
2010
148views more  BMCBI 2010»
13 years 8 months ago
Calling SNPs without a reference sequence
Background: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a refere...
Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan...
BMCBI
2010
84views more  BMCBI 2010»
13 years 8 months ago
Word add-in for ontology recognition: semantic enrichment of scientific literature
Background: In the current era of scientific research, efficient communication of information is paramount. As such, the nature of scholarly and scientific communication is changi...
J. Lynn Fink, Pablo Fernicola, Rahul Chandran, Sav...
BMCBI
2010
103views more  BMCBI 2010»
13 years 8 months ago
MTRAP: Pairwise sequence alignment algorithm by a new measure based on transition probability between two consecutive pairs of r
Background: Sequence alignment is one of the most important techniques to analyze biological systems. It is also true that the alignment is not complete and we have to develop it ...
Toshihide Hara, Keiko Sato, Masanori Ohya
BMCBI
2010
175views more  BMCBI 2010»
13 years 8 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
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