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BIBE
2003
IEEE
133views Bioinformatics» more  BIBE 2003»
14 years 27 days ago
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale
The tertiary (3D) structure of a protein contains the essential information for understanding the biological function of the protein at the molecular and cellular levels. Traditio...
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyl...
BMCBI
2010
139views more  BMCBI 2010»
13 years 7 months ago
TOPSAN: a collaborative annotation environment for structural genomics
Background: Many protein structures determined in high-throughput structural genomics centers, despite their significant novelty and importance, are available only as PDB depositi...
Dana Weekes, S. Sri Krishna, Constantina Bakolitsa...
BMCBI
2006
159views more  BMCBI 2006»
13 years 7 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
DAC
2005
ACM
14 years 8 months ago
Freeze: engineering a fast repeater insertion solver for power minimization using the ellipsoid method
This paper presents a novel repeater insertion algorithm for the power minimization of realistic interconnect trees under given timing budgets. Our algorithm judiciously combines ...
Yuantao Peng, Xun Liu
DSN
2009
IEEE
14 years 2 months ago
Fitness-guided path exploration in dynamic symbolic execution
Dynamic symbolic execution is a structural testing technique that systematically explores feasible paths of the program under test by running the program with different test input...
Tao Xie, Nikolai Tillmann, Jonathan de Halleux, Wo...