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NAR
2006
59views more  NAR 2006»
13 years 10 months ago
GenDecoder: genetic code prediction for metazoan mitochondria
Although the majority of the organisms use the same genetic code to translate DNA, several variants have been described in a wide range of organisms, both in nuclear and organella...
Federico Abascal, Rafael Zardoya, David Posada
NAR
1998
88views more  NAR 1998»
13 years 10 months ago
SV40 large tumor antigen (T antigen): database of mutants
The SV40 T antigen database (http://www.pitt.edu/ ∼pipaslab/ ) lists viruses and plasmids expressing mutant forms of large T antigen. Each entry contains information regarding t...
Clifford G. Robinson, James M. Pipas
BMCBI
2006
129views more  BMCBI 2006»
13 years 10 months ago
Fast index based algorithms and software for matching position specific scoring matrices
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
Michael Beckstette, Robert Homann, Robert Giegeric...
BIOINFORMATICS
2006
95views more  BIOINFORMATICS 2006»
13 years 10 months ago
Family specific rates of protein evolution
: Amino acid changing mutations in proteins are contstrained by purifying selection and accumulate at different rates. We estimate evolutionary rates on multiple alignments of euka...
Hannes Luz, Martin Vingron
NAR
2006
61views more  NAR 2006»
13 years 10 months ago
E-MSD: improving data deposition and structure quality
The Macromolecular Structure Database (MSD) (http://www.ebi.ac.uk/msd/) [H. Boutselakis, D. Dimitropoulos, J. Fillon, A. Golovin, K. Henrick, A. Hussain, J. Ionides, M. John, P. A...
Mohammed Tagari, John G. Tate, G. J. Swaminathan, ...