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    ALMOB
    2006
    80views more  ALMOB 2006»
    Effective p-value computations using Finite Markov Chain Imbedding (FMCI): application to local score and to pattern statistics
    13 years 11 months ago
    Effective p-value computations using Finite Markov Chain Imbedding (FMCI): application to local score and to pattern statistics
    Download  www.almob.org
    The technique of Finite Markov Chain Imbedding (FMCI) is a classical approach to complex combinatorial problems related to sequences. In order to get efficient algorithms, it is k...
    Grégory Nuel
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    ALMOB
    2006
    80views more  ALMOB 2006»
    Pattern statistics on Markov chains and sensitivity to parameter estimation
    13 years 11 months ago
    Pattern statistics on Markov chains and sensitivity to parameter estimation
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    Background: In order to compute pattern statistics in computational biology a Markov model is commonly used to take into account the sequence composition. Usually its parameter mu...
    Grégory Nuel
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    ALMOB
    2006
    138views more  ALMOB 2006»
    A combinatorial optimization approach for diverse motif finding applications
    13 years 11 months ago
    A combinatorial optimization approach for diverse motif finding applications
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    Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
    Elena Zaslavsky, Mona Singh
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    ALMOB
    2006
    102views more  ALMOB 2006»
    Mining, compressing and classifying with extensible motifs
    13 years 11 months ago
    Mining, compressing and classifying with extensible motifs
    Download  www.biomedcentral.com
    Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
    Alberto Apostolico, Matteo Comin, Laxmi Parida
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    ALMOB
    2006
    110views more  ALMOB 2006»
    New journal: Algorithms for Molecular Biology
    13 years 11 months ago
    New journal: Algorithms for Molecular Biology
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    This editorial announces Algorithms for Molecular Biology, a new online open access journal published by BioMed Central. By launching the first open access journal on algorithmic ...
    Burkhard Morgenstern, Peter F. Stadler
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