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BIOCOMP
2008
13 years 11 months ago
Improved Segmentation Based on Probabilistic Labeling
⎯This paper presents an improved multi-object segmentation algorithm based on probabilistic labeling. First, a critical look is focused on utilizing vector calculus operator and ...
Kai-Chieh Yang, Ming-Chi Jhuang, Chun-Shun Tseng, ...
BIOCOMP
2007
13 years 11 months ago
Quality-Based Similarity Search for Biological Sequence Databases
Low-Complexity Regions (LCRs) of biological sequences are the main source of false positives in similarity searches for biological sequence databases. We consider the problem of ï...
Xuehui Li, Tamer Kahveci
BIOCOMP
2007
13 years 11 months ago
Towards Phylogenomic Reconstruction
Reconstructing phylogenies is one of the primary objectives in evolution studies. Efficient software to reconstruct phylogenies based on isolated genes has existed for decades, ye...
Le Vinh, Andres Varon, Daniel Janies, Ward Wheeler
BIOCOMP
2007
13 years 11 months ago
Biomarker Discovery Across Annotated and Unannotated Microarray Datasets Using Semi-Supervised Learning
The growing body of DNA microarray data has the potential to advance our understanding of the molecular basis of disease. However annotating microarray datasets with clinically us...
Cole Harris, Noushin Ghaffari
BIOCOMP
2007
13 years 11 months ago
Interaction Models for Biochemical Reactions
Abstract—This paper presents a stochastic modelling framework for complex biochemical reaction networks from a component-based perspective. Our approach takes into account the di...
Mila E. Majster-Cederbaum, Nils Semmelrock, Verena...