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BIOINFORMATICS
2006
13 years 9 months ago
2006
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
BIOINFORMATICS
2005
13 years 9 months ago
2005
Oligonucleotide fingerprinting is an array-based approach used for analysis of microbial community composition and gene expression profiling. Oligonucleotide fingerprinting of rib...
BIOINFORMATICS
2005
13 years 9 months ago
2005
Inner holes, artifacts and blank spots are common in microarray images, but current image analysis methods do not pay them enough attention. We propose a new robust model-based me...
BIOINFORMATICS
2005
13 years 9 months ago
2005
Motivation: Intervention in a gene regulatory network is used to help it avoid undesirable states, such as those associated with a disease. Several types of intervention have been...
BIOINFORMATICS
2005
13 years 9 months ago
2005
Motivation. Spotted arrays are often printed with probes in duplicate or triplicate, but current methods for assessing differential expression are not able to make full use of the...