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BIOINFORMATICS
2004
119views more  BIOINFORMATICS 2004»
13 years 9 months ago
Analysis of variance components in gene expression data
Motivation: A microarray experiment is a multi-step process, and each step is a potential source of variation. There are two major sources of variation: biological variation and t...
James J. Chen, Robert R. Delongchamp, Chen-An Tsai...
BIOINFORMATICS
2000
149views more  BIOINFORMATICS 2000»
13 years 9 months ago
MaxSub: an automated measure for the assessment of protein structure prediction quality
Motivation: Evaluating the accuracy of predicted models is critical for assessing structure prediction methods. Because this problem is not trivial, a large number of different as...
Naomi Siew, Arne Elofsson, Leszek Rychlewski, Dani...
BIOINFORMATICS
1999
65views more  BIOINFORMATICS 1999»
13 years 9 months ago
Genetic Simulation Library
Summary: The Genetic Simulation Library (GSL) is a set of C++ programs and classes that can be used in individualbased simulation models of plant and animal populations. The class...
John S. Conery, Michael Lynch
BIOINFORMATICS
2005
151views more  BIOINFORMATICS 2005»
13 years 9 months ago
Differential and trajectory methods for time course gene expression data
Motivation: The issue of high dimensionality in microarray data has been, and remains, a hot topic in statistical and computational analysis. Efficient gene filtering and differen...
Yulan Liang, Bamidele Tayo, Xueya Cai, Arpad Kelem...
DNA
2008
Springer
104views Bioinformatics» more  DNA 2008»
13 years 11 months ago
Self-assembly of Discrete Self-similar Fractals
In this paper, we search for theoretical limitations of the Tile Assembly Model (TAM), along with techniques to work around such limitations. Specifically, we investigate the self...
Matthew J. Patitz, Scott M. Summers