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ICPADS
2008
IEEE
14 years 4 months ago
Parallel Large Scale Inference of Protein Domain Families
The resolution of combinatorial assortments of protein sequences into domains is a prerequisite for protein sequence interpretation. However the recognition and clustering of homo...
Daniel Kahn, Clément Rezvoy, Fréd&ea...
IJCNN
2008
IEEE
14 years 4 months ago
A neural network approach to ordinal regression
— Ordinal regression is an important type of learning, which has properties of both classification and regression. Here we describe an effective approach to adapt a traditional ...
Jianlin Cheng, Zheng Wang, Gianluca Pollastri
ANNPR
2008
Springer
13 years 12 months ago
Patch Relational Neural Gas - Clustering of Huge Dissimilarity Datasets
Clustering constitutes an ubiquitous problem when dealing with huge data sets for data compression, visualization, or preprocessing. Prototype-based neural methods such as neural g...
Alexander Hasenfuss, Barbara Hammer, Fabrice Rossi
CIBB
2008
13 years 12 months ago
Unsupervised Stability-Based Ensembles to Discover Reliable Structures in Complex Bio-molecular Data
The assessment of the reliability of clusters discovered in bio-molecular data is a central issue in several bioinformatics problems. Several methods based on the concept of stabil...
Alberto Bertoni, Giorgio Valentini
FPL
2008
Springer
150views Hardware» more  FPL 2008»
13 years 11 months ago
Compiler generated systolic arrays for wavefront algorithm acceleration on FPGAs
Wavefront algorithms, such as the Smith-Waterman algorithm, are commonly used in bioinformatics for exact local and global sequence alignment. These algorithms are highly computat...
Betul Buyukkurt, Walid A. Najjar