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BMCBI
2005
144views more  BMCBI 2005»
13 years 11 months ago
Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in
Background: Comparison of data produced on different microarray platforms often shows surprising discordance. It is not clear whether this discrepancy is caused by noisy data or b...
Scott L. Carter, Aron C. Eklund, Brigham H. Mecham...
BMCBI
2005
92views more  BMCBI 2005»
13 years 11 months ago
Predicting functional sites with an automated algorithm suitable for heterogeneous datasets
Background: In a previous report (La et al., Proteins, 2005), we have demonstrated that the identification of phylogenetic motifs, protein sequence fragments conserving the overal...
David La, Dennis R. Livesay
BMCBI
2005
106views more  BMCBI 2005»
13 years 11 months ago
ESTree db: a Tool for Peach Functional Genomics
Background: The ESTree db http://www.itb.cnr.it/estree/ represents a collection of Prunus persica expressed sequenced tags (ESTs) and is intended as a resource for peach functiona...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
BMCBI
2008
105views more  BMCBI 2008»
13 years 11 months ago
Objective and automated protocols for the evaluation of biomedical search engines using No Title Evaluation protocols
Background: The evaluation of information retrieval techniques has traditionally relied on human judges to determine which documents are relevant to a query and which are not. Thi...
Fabien Campagne
BMCBI
2005
153views more  BMCBI 2005»
13 years 11 months ago
A comparative review of estimates of the proportion unchanged genes and the false discovery rate
Background: In the analysis of microarray data one generally produces a vector of p-values that for each gene give the likelihood of obtaining equally strong evidence of change by...
Per Broberg