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BMCBI
2005
82views more  BMCBI 2005»
13 years 11 months ago
Sources of variation in Affymetrix microarray experiments
Stanislav O. Zakharkin, Kyoungmi Kim, Tapan Mehta,...
BMCBI
2005
89views more  BMCBI 2005»
13 years 11 months ago
MILANO - custom annotation of microarray results using automatic literature searches
Background: High-throughput genomic research tools are becoming standard in the biologist's toolbox. After processing the genomic data with one of the many available statisti...
Ran Rubinstein, Itamar Simon
BMCBI
2005
122views more  BMCBI 2005»
13 years 11 months ago
ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequenc
Background: Currently available methods to predict splice sites are mainly based on the independent and progressive alignment of transcript data (mostly ESTs) to the genomic seque...
Paola Bonizzoni, Raffaella Rizzi, Graziano Pesole
BMCBI
2005
72views more  BMCBI 2005»
13 years 11 months ago
Shortest triplet clustering: reconstructing large phylogenies using representative sets
Background: Understanding the evolutionary relationships among species based on their genetic information is one of the primary objectives in phylogenetic analysis. Reconstructing...
Le Sy Vinh, Arndt von Haeseler
BMCBI
2005
96views more  BMCBI 2005»
13 years 11 months ago
Evaluating eukaryotic secreted protein prediction
Background: Improvements in protein sequence annotation and an increase in the number of annotated protein databases has fueled development of an increasing number of software too...
Eric W. Klee, Lynda B. M. Ellis