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BMCBI
2008
123views more  BMCBI 2008»
13 years 8 months ago
Pol II promoter prediction using characteristic 4-mer motifs: a machine learning approach
Background: Eukaryotic promoter prediction using computational analysis techniques is one of the most difficult jobs in computational genomics that is essential for constructing a...
Firoz Anwar, Syed Murtuza Baker, Taskeed Jabid, Md...
BMCBI
2008
122views more  BMCBI 2008»
13 years 8 months ago
OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein tr
Background: Information extraction (IE) efforts are widely acknowledged to be important in harnessing the rapid advance of biomedical knowledge, particularly in areas where import...
Lawrence Hunter, Zhiyong Lu, James Firby, William ...
BMCBI
2008
74views more  BMCBI 2008»
13 years 8 months ago
Prediction of mucin-type O-glycosylation sites in mammalian proteins using the composition of k-spaced amino acid pairs
Background: As one of the most common protein post-translational modifications, glycosylation is involved in a variety of important biological processes. Computational identificat...
Yong-Zi Chen, Yu-Rong Tang, Zhi-Ya Sheng, Ziding Z...
BMCBI
2008
113views more  BMCBI 2008»
13 years 8 months ago
A novel application of quantile regression for identification of biomarkers exemplified by equine cartilage microarray data
Background: Identification of biomarkers among thousands of genes arrayed for disease classification has been the subject of considerable research in recent years. These studies h...
Liping Huang, Wenying Zhu, Christopher P. Saunders...
BMCBI
2008
85views more  BMCBI 2008»
13 years 8 months ago
Predicted mouse peroxisome-targeted proteins and their actual subcellular locations
Background: The import of most intraperoxisomal proteins is mediated by peroxisome targeting signals at their C-termini (PTS1) or N-terminal regions (PTS2). Both signals have been...
Yumi Mizuno, Igor Kurochkin, Marlis Herberth, Yasu...