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    BMCBI
    2008
    118views more  BMCBI 2008»
    MetWAMer: eukaryotic translation initiation site prediction
    13 years 8 months ago
    MetWAMer: eukaryotic translation initiation site prediction
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    Background: Translation initiation site (TIS) identification is an important aspect of the gene annotation process, requisite for the accurate delineation of protein sequences fro...
    Michael E. Sparks, Volker Brendel
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    BMCBI
    2008
    107views more  BMCBI 2008»
    A machine learning approach to explore the spectra intensity pattern of peptides using tandem mass spectrometry data
    13 years 8 months ago
    A machine learning approach to explore the spectra intensity pattern of peptides using tandem mass spectrometry data
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    Background: A better understanding of the mechanisms involved in gas-phase fragmentation of peptides is essential for the development of more reliable algorithms for high-throughp...
    Cong Zhou, Lucas D. Bowler, Jianfeng Feng
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    BMCBI
    2008
    128views more  BMCBI 2008»
    Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
    13 years 8 months ago
    Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure
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    Background: Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models ...
    Christopher Bystroff, Bobbie-Jo M. Webb-Robertson
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    BMCBI
    2008
    114views more  BMCBI 2008»
    A visual analytics approach for understanding biclustering results from microarray data
    13 years 8 months ago
    A visual analytics approach for understanding biclustering results from microarray data
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    Background: Microarray analysis is an important area of bioinformatics. In the last few years, biclustering has become one of the most popular methods for classifying data from mi...
    Rodrigo Santamaría, Roberto Therón, ...
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    BMCBI
    2008
    140views more  BMCBI 2008»
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    13 years 8 months ago
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
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    Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
    Kazutaka Katoh, Hiroyuki Toh
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