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95
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CMSB
2007
Springer
15 years 9 months ago
Modelling Yeast Pre-rRNA Processing
Federica Ciocchetta, Jane Hillston, Martin Kos, Da...
93
Voted
CMSB
2007
Springer
15 years 7 months ago
A Formal and Integrated Framework to Simulate Evolution of Biological Pathways
Lorenzo Dematté, Corrado Priami, Alessandro...
111
Voted
CMSB
2007
Springer
15 years 7 months ago
Efficient, Correct Simulation of Biological Processes in the Stochastic Pi-calculus
This paper presents a simulation algorithm for the stochastic -calculus, designed for the efficient simulation of biological systems with large numbers of molecules. The cost of a ...
Andrew Phillips, Luca Cardelli
153
Voted
CMSB
2007
Springer
15 years 9 months ago
Context Sensitivity in Logical Modeling with Time Delays
For modeling and analyzing regulatory networks based on qualitative information and possibly additional temporal constraints, approaches using hybrid automata can be very helpful. ...
Heike Siebert, Alexander Bockmayr
130
Voted
CMSB
2007
Springer
15 years 9 months ago
Reconstructing Metabolic Pathways by Bidirectional Chemical Search
Abstract. One of the main challenges in systems biology is the establishment of the metabolome: a catalogue of the metabolites and biochemical reactions present in a specific orga...
Liliana Félix, Francesc Rosselló, Ga...