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MP
1998
108views more  MP 1998»
13 years 6 months ago
Base polytopes of series-parallel posets: Linear description and optimization
We define the base polytope B(P, g) of a partially ordered set P and a supermodular function g on the ideals ofP as the convex hull of the incidence vectors of all linear extensio...
Rainer Schrader, Andreas S. Schulz, Georg Wambach
CPM
1998
Springer
209views Combinatorics» more  CPM 1998»
13 years 10 months ago
A Fast Bit-Vector Algorithm for Approximate String Matching Based on Dynamic Programming
The approximate string matching problem is to find all locations at which a query of length m matches a substring of a text of length n with k-or-fewer differences. Simple and prac...
Gene Myers
COCOON
1998
Springer
13 years 10 months ago
The Colored Sector Search Tree: A Dynamic Data Structure for Efficient High Dimensional Nearest-Foreign-Neighbor Queries
Abstract. In this paper we present the new data structure Colored Sector Search Tree (CSST ) for solving the Nearest-Foreign-Neighbor Query Problem (NFNQP ): Given a set S of n col...
Thomas Graf, V. Kamakoti, N. S. Janaki Latha, C. P...
ISAAC
1998
Springer
94views Algorithms» more  ISAAC 1998»
13 years 10 months ago
Two-Layer Planarization in Graph Drawing
Abstract. We study the two-layer planarization problems that have applications in Automatic Graph Drawing. We are searching for a two-layer planar subgraph of maximumweight in a gi...
Petra Mutzel, René Weiskircher
RECOMB
1998
Springer
13 years 10 months ago
A polyhedral approach to RNA sequence structure alignment
Ribonucleic acid (RNA) is a polymer composed of four bases denoted A, C, G, and U. It is a generally single-stranded molecule where the bases form hydrogen bonds within the same m...
Hans-Peter Lenhof, Knut Reinert, Martin Vingron