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CPM
2005
Springer
106views Combinatorics» more  CPM 2005»
14 years 1 months ago
An Optimal Algorithm for Online Square Detection
A square is the concatenation of two identical non-empty strings. Let S be the input string which is given character by character. Let m be the (unknown) smallest integer such that...
Gen-Huey Chen, Jin-Ju Hong, Hsueh-I Lu
SIGMOD
2005
ACM
254views Database» more  SIGMOD 2005»
14 years 7 months ago
Conceptual Partitioning: An Efficient Method for Continuous Nearest Neighbor Monitoring
Given a set of objects P and a query point q, a k nearest neighbor (k-NN) query retrieves the k objects in P that lie closest to q. Even though the problem is well-studied for sta...
Kyriakos Mouratidis, Marios Hadjieleftheriou, Dimi...
CPM
2005
Springer
206views Combinatorics» more  CPM 2005»
14 years 1 months ago
A Fast Algorithm for Approximate String Matching on Gene Sequences
Abstract. Approximate string matching is a fundamental and challenging problem in computer science, for which a fast algorithm is highly demanded in many applications including tex...
Zheng Liu, Xin Chen, James Borneman, Tao Jiang
CPM
2005
Springer
101views Combinatorics» more  CPM 2005»
14 years 1 months ago
Succinct Suffix Arrays Based on Run-Length Encoding
A succinct full-text self-index is a data structure built on a text T = t1t2 . . . tn, which takes little space (ideally close to that of the compressed text), permits efficient se...
Veli Mäkinen, Gonzalo Navarro
CPM
2005
Springer
109views Combinatorics» more  CPM 2005»
14 years 1 months ago
Using PQ Trees for Comparative Genomics
Permutations on strings representing gene clusters on genomes have been studied earlier in [18, 14, 3, 12, 17] and the idea of a maximal permutation pattern was introduced in [12]....
Gad M. Landau, Laxmi Parida, Oren Weimann