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IPPS
2000
IEEE
14 years 2 months ago
Take Advantage of the Computing Power of DNA Computers
Ever since Adleman [1] solved the Hamilton Path problem using a combinatorial molecular method, many other hard computational problems have been investigated with the proposed DNA ...
Zhiquan Frank Qiu, Mi Lu
DNA
2005
Springer
113views Bioinformatics» more  DNA 2005»
14 years 3 months ago
A Self-assembly Model of Time-Dependent Glue Strength
Abstract Self-assembly is a ubiquitous process in which small objects selforganize into larger and complex structures. In 2000, Rothemund and Winfree proposed a Tile Assembly Model...
Sudheer Sahu, Peng Yin, John H. Reif
EJC
2008
13 years 10 months ago
Pooling spaces associated with finite geometry
3 Motivated by the works of Ngo and Du [H. Ngo, D. Du, A survey on combinatorial group testing 4 algorithms with applications to DNA library screening, DIMACS Series in Discrete Ma...
Tayuan Huang, Kaishun Wang, Chih-wen Weng
ISMB
2000
13 years 11 months ago
A Statistical Method for Finding Transcription Factor Binding Sites
Understanding the mechanismsthat determine the regulation of geneexpression is an important and challenging problem. A fundamental subproblem is to identify DNA-bindingsites for u...
Saurabh Sinha, Martin Tompa
RECOMB
2000
Springer
14 years 1 months ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal