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NIPS
2001
14 years 7 days ago
Thin Junction Trees
We present an algorithm that induces a class of models with thin junction trees--models that are characterized by an upper bound on the size of the maximal cliques of their triang...
Francis R. Bach, Michael I. Jordan
RECOMB
2001
Springer
14 years 11 months ago
Fast recovery of evolutionary trees with thousands of nodes
We present a novel distance-based algorithm for evolutionary tree reconstruction. Our algorithm reconstructs the topology of a tree with n leaves in O(n2 ) time using O(n) working...
Miklós Csürös
RECOMB
2001
Springer
14 years 11 months ago
Applications of generalized pair hidden Markov models to alignment and gene finding problems
Hidden Markov models (HMMs) have been successfully applied to a variety of problems in molecular biology, ranging from alignment problems to gene nding and annotation. Alignment p...
Lior Pachter, Marina Alexandersson, Simon Cawley
ICML
2004
IEEE
14 years 11 months ago
Training conditional random fields via gradient tree boosting
Conditional Random Fields (CRFs; Lafferty, McCallum, & Pereira, 2001) provide a flexible and powerful model for learning to assign labels to elements of sequences in such appl...
Thomas G. Dietterich, Adam Ashenfelter, Yaroslav B...
EMMCVPR
2001
Springer
14 years 3 months ago
Designing the Minimal Structure of Hidden Markov Model by Bisimulation
Hidden Markov Models (HMMs) are an useful and widely utilized approach to the modeling of data sequences. One of the problems related to this technique is finding the optimal stru...
Manuele Bicego, Agostino Dovier, Vittorio Murino