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IDEAL
2007
Springer
14 years 2 months ago
Methods to Bicluster Validation and Comparison in Microarray Data
There are lots of validation indexes and techniques to study clustering results. Biclustering algorithms have been applied in Systems Biology, principally in DNA Microarray analysi...
Rodrigo Santamaría, Luis Quintales, Roberto...
IJFCS
2007
109views more  IJFCS 2007»
13 years 8 months ago
Computational Power of intramolecular gene Assembly
The process of gene assembly in ciliates, an ancient group of organisms, is one of the most complex instances of DNA manipulation known in any organism. Three molecular operations...
Tseren-Onolt Ishdorj, Ion Petre, Vladimir Rogojin
BMCBI
2005
63views more  BMCBI 2005»
13 years 8 months ago
Individual sequences in large sets of gene sequences may be distinguished efficiently by combinations of shared sub-sequences
Background: Most current DNA diagnostic tests for identifying organisms use specific oligonucleotide probes that are complementary in sequence to, and hence only hybridise with th...
Mark J. Gibbs, John S. Armstrong, Adrian J. Gibbs
IJFCS
2007
111views more  IJFCS 2007»
13 years 8 months ago
Involutively Bordered Words
In this paper we study a generalization of the classical notions of bordered and unbordered words, motivated by DNA computing. DNA strands can be viewed as finite strings over th...
Lila Kari, Kalpana Mahalingam
IPPS
2007
IEEE
14 years 2 months ago
Reconfigurable Architecture for Biological Sequence Comparison in Reduced Memory Space
DNA sequence alignment is a very important problem in bioinformatics. The algorithm proposed by Smith-Waterman (SW) is an exact method that obtains optimal local alignments in qua...
Azzedine Boukerche, Jan Mendonca Correa, Alba Cris...