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ALGORITHMICA
2011
13 years 5 months ago
All-Pairs Bottleneck Paths in Vertex Weighted Graphs
Let G = (V, E, w) be a directed graph, where w : V → R is an arbitrary weight function defined on its vertices. The bottleneck weight, or the capacity, of a path is the smalles...
Asaf Shapira, Raphael Yuster, Uri Zwick
BMCBI
2010
117views more  BMCBI 2010»
13 years 5 months ago
Screensaver: an open source lab information management system (LIMS) for high throughput screening facilities
Background: Shared-usage high throughput screening (HTS) facilities are becoming more common in academe as large-scale small molecule and genome-scale RNAi screening strategies ar...
Andrew N. Tolopko, John P. Sullivan, Sean D. Erick...
BMCBI
2010
148views more  BMCBI 2010»
13 years 5 months ago
SKPDB: a structural database of shikimate pathway enzymes
Background: The functional and structural characterisation of enzymes that belong to microbial metabolic pathways is very important for structure-based drug design. The main inter...
Helen A. Arcuri, Geraldo F. D. Zafalon, Evandro A....
BMCBI
2010
145views more  BMCBI 2010»
13 years 5 months ago
Directionality in protein fold prediction
Background: Ever since the ground-breaking work of Anfinsen et al. in which a denatured protein was found to refold to its native state, it has been frequently stated by the prote...
Jonathan J. Ellis, Fabien P. E. Huard, Charlotte M...
BMCBI
2010
172views more  BMCBI 2010»
13 years 5 months ago
Nonparametric identification of regulatory interactions from spatial and temporal gene expression data
Background: The correlation between the expression levels of transcription factors and their target genes can be used to infer interactions within animal regulatory networks, but ...
Anil Aswani, Soile V. E. Keränen, James Brown...
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