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» eResearch Solutions for High Throughput Structural Biology
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FPGA
2009
ACM
273views FPGA» more  FPGA 2009»
14 years 2 months ago
A parallel/vectorized double-precision exponential core to accelerate computational science applications
Many natural processes exhibit exponential decay and, consequently, computational scientists make extensive use of e−x in computer simulation experiments. While it is common to ...
Robin Pottathuparambil, Ron Sass
BMCBI
2010
218views more  BMCBI 2010»
13 years 7 months ago
Fast multi-core based multimodal registration of 2D cross-sections and 3D datasets
Background: Solving bioinformatics tasks often requires extensive computational power. Recent trends in processor architecture combine multiple cores into a single chip to improve...
Michael Scharfe, Rainer Pielot, Falk Schreiber
SIGMOD
2010
ACM
324views Database» more  SIGMOD 2010»
14 years 6 days ago
Similarity search and locality sensitive hashing using ternary content addressable memories
Similarity search methods are widely used as kernels in various data mining and machine learning applications including those in computational biology, web search/clustering. Near...
Rajendra Shinde, Ashish Goel, Pankaj Gupta, Debojy...
GIS
2004
ACM
14 years 8 months ago
Object-relational management of complex geographical objects
Modern database applications including computer-aided design, multimedia information systems, medical imaging, molecular biology, or geographical information systems impose new re...
Hans-Peter Kriegel, Peter Kunath, Martin Pfeifle, ...
BMCBI
2008
79views more  BMCBI 2008»
13 years 7 months ago
In silico docking of urokinase plasminogen activator and integrins
Background: Urokinase, its receptor and the integrins are functionally associated and involved in regulation of cell signaling, migration, adhesion and proliferation. No structura...
Bernard Degryse, Juan Fernández-Recio, Vale...