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JBI
2008
13 years 7 months ago
The Field Representation Language
The complexity of quantitative biomedical models, and the rate at which they are published, is increasing to a point where managing the information has become all but impossible w...
Guy Tsafnat
JBI
2008
137views Bioinformatics» more  JBI 2008»
13 years 7 months ago
Mining sequential patterns for protein fold recognition
Protein data contain discriminative patterns that can be used in many beneficial applications if they are defined correctly. In this work sequential pattern mining (SPM) is utiliz...
Themis P. Exarchos, Costas Papaloukas, Christos La...
JBI
2008
119views Bioinformatics» more  JBI 2008»
13 years 7 months ago
Decision tool for the early diagnosis of trauma patient hypovolemia
We present a classifier for use as a decision assist tool to identify a hypovolemic state in trauma patients during helicopter transport to a hospital, when reliable acquisition o...
Liangyou Chen, Thomas M. McKenna, Andrew T. Reisne...
JBI
2008
159views Bioinformatics» more  JBI 2008»
13 years 7 months ago
SEGS: Search for enriched gene sets in microarray data
Gene Ontology (GO) terms are often used to interpret the results of microarray experiments. The most common approach is to perform Fisher's exact tests to find gene sets anno...
Igor Trajkovski, Nada Lavrac, Jakub Tolar
JBI
2006
13 years 7 months ago
Bioinformatics and biological reality
Many bioinformaticians seem to shy away from believing that we can have knowledge about a mind-independent biological reality. This paper attempts to show that this tendency is ne...
Ingvar Johansson