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IPPS
2010
IEEE
13 years 7 months ago
Multicore-aware reuse distance analysis
This paper presents and validates methods to extend reuse distance analysis of application locality characteristics to shared-memory multicore platforms by accounting for invalidat...
Derek L. Schuff, Benjamin S. Parsons, Vijay S. Pai
WCET
2010
13 years 7 months ago
Towards WCET Analysis of Multicore Architectures Using UPPAAL
To take full advantage of the increasingly used shared-memory multicore architectures, software algorithms will need to be parallelized over multiple threads. This means that thre...
Andreas Gustavsson, Andreas Ermedahl, Björn L...
BMCBI
2010
164views more  BMCBI 2010»
13 years 10 months ago
Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions
Background: The pan-genome of a bacterial species consists of a core and an accessory gene pool. The accessory genome is thought to be an important source of genetic variability i...
Chad Laing, Cody Buchanan, Eduardo N. Taboada, Yon...
BMCBI
2010
116views more  BMCBI 2010»
13 years 10 months ago
permGPU: Using graphics processing units in RNA microarray association studies
Background: Many analyses of microarray association studies involve permutation, bootstrap resampling and crossvalidation, that are ideally formulated as embarrassingly parallel c...
Ivo D. Shterev, Sin-Ho Jung, Stephen L. George, Ko...
SIAMCOMP
2010
109views more  SIAMCOMP 2010»
13 years 4 months ago
Analysis of Delays Caused by Local Synchronization
Synchronization is often necessary in parallel computing, but it can create delays whenever the receiving processor is idle, waiting for the information to arrive. This is especia...
Julia Lipman, Quentin F. Stout