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BMCBI
2010
108views more  BMCBI 2010»
13 years 10 months ago
An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs
Background: Transcription factors (TFs) control transcription by binding to specific regions of DNA called transcription factor binding sites (TFBSs). The identification of TFBSs ...
Fernando Garcia-Alcalde, Armando Blanco, Adrian J....
BMCBI
2010
151views more  BMCBI 2010»
13 years 10 months ago
Using diffusion distances for flexible molecular shape comparison
Background: Many molecules are flexible and undergo significant shape deformation as part of their function, and yet most existing molecular shape comparison (MSC) methods treat t...
Yu-Shen Liu, Qi Li, Guo-Qin Zheng, Karthik Ramani,...
COGSCI
2010
125views more  COGSCI 2010»
13 years 10 months ago
A Probabilistic Computational Model of Cross-Situational Word Learning
Words are the essence of communication: they are the building blocks of any language. Learning the meaning of words is thus one of the most important aspects of language acquisiti...
Afsaneh Fazly, Afra Alishahi, Suzanne Stevenson
DAM
2010
112views more  DAM 2010»
13 years 10 months ago
New results on optimizing rooted triplets consistency
Abstract. A set of phylogenetic trees with overlapping leaf sets is consistent if it can be merged without conflicts into a supertree. In this paper, we study the polynomial-time a...
Jaroslaw Byrka, Sylvain Guillemot, Jesper Jansson
DCG
2010
289views more  DCG 2010»
13 years 10 months ago
Algorithms for Approximate Shortest Path Queries on Weighted Polyhedral Surfaces
We consider the well known geometric problem of determining shortest paths between pairs of points on a polyhedral surface P, where P consists of triangular faces with positive we...
Lyudmil Aleksandrov, Hristo Djidjev, Hua Guo, Anil...