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BMCBI
2010
161views more  BMCBI 2010»
13 years 10 months ago
BPDA - A Bayesian peptide detection algorithm for mass spectrometry
Background: Mass spectrometry (MS) is an essential analytical tool in proteomics. Many existing algorithms for peptide detection are based on isotope template matching and usually...
Youting Sun, Jianqiu Zhang, Ulisses Braga-Neto, Ed...
BMCBI
2010
132views more  BMCBI 2010»
13 years 10 months ago
Data structures and compression algorithms for high-throughput sequencing technologies
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...
CONCURRENCY
2010
130views more  CONCURRENCY 2010»
13 years 10 months ago
Enabling high-speed asynchronous data extraction and transfer using DART
As the complexity and scale of current scientific and engineering applications grow, managing and transporting the large amounts of data they generate is quickly becoming a signif...
Ciprian Docan, Manish Parashar, Scott Klasky
ENTCS
2006
97views more  ENTCS 2006»
13 years 10 months ago
VyrdMC: Driving Runtime Refinement Checking with Model Checkers
This paper presents VyrdMC, a runtime verification tool we are building for concurrent software components. The correctness criterion checked by VyrdMC is refinement: Each executi...
Tayfun Elmas, Serdar Tasiran
ENTCS
2006
180views more  ENTCS 2006»
13 years 10 months ago
Mobile Synchronizing Petri Nets: A Choreographic Approach for Coordination in Ubiquitous Systems
The term Ubiquitous Computing was coined by Mark Weiser almost two decades ago. Despite all the time that has passed since Weiser's vision, ubiquitous computing still has a l...
Fernando Rosa Velardo, Olga Marroquín Alons...