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TCS
2011
13 years 5 months ago
An algorithmic framework for network reconstruction
Models of biological systems and phenomena are of high scientific interest and practical relevance, but not always easy to obtain due to their inherent complexity. To gain the re...
Markus Durzinsky, Annegret Wagler, Robert Weismant...
TCS
2011
13 years 5 months ago
Minimal non-convex words
Using a combinatorial characterization of digital convexity based on words, one defines the language of convex words. The complement of this language forms an ideal whose minimal...
Xavier Provençal
TCS
2011
13 years 5 months ago
Sorting and selection on dynamic data
We formulate and study a new computational model for dynamic data. In this model, the data changes gradually and the goal of an algorithm is to compute the solution to some proble...
Aris Anagnostopoulos, Ravi Kumar, Mohammad Mahdian...
TCS
2011
13 years 5 months ago
Parameter estimation for Boolean models of biological networks
Boolean networks have long been used as models of molecular networks and play an increasingly important role in systems biology. This paper describes a software package, offered ...
Elena S. Dimitrova, Luis David García-Puent...
TCS
2011
13 years 5 months ago
Dynamic normal forms and dynamic characteristic polynomial
Abstract. We present the first fully dynamic algorithm for computing the characteristic polynomial of a matrix. In the generic symmetric case our algorithm supports rank-one updat...
Gudmund Skovbjerg Frandsen, Piotr Sankowski