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BMCBI
2008
100views more  BMCBI 2008»
13 years 8 months ago
easyExon - A Java-based GUI tool for processing and visualization of Affymetrix exon array data
Background: Alternative RNA splicing greatly increases proteome diversity and thereby contribute to species- or tissue-specific functions. The possibility to study alternative spl...
Ting-Yu Chang, Yin-Yi Li, Chih-Hung Jen, Tsun-Po Y...
BMCBI
2008
84views more  BMCBI 2008»
13 years 8 months ago
DNAAlignEditor: DNA alignment editor tool
Background: With advances in DNA re-sequencing methods and Next-Generation parallel sequencing approaches, there has been a large increase in genomic efforts to define and analyze...
Hector Sanchez-Villeda, Steven G. Schroeder, Sherr...
BMCBI
2008
107views more  BMCBI 2008»
13 years 8 months ago
RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences
Background: Repeat-induced point mutation (RIP) is a fungal-specific genome defence mechanism that alters the sequences of repetitive DNA, thereby inactivating coding genes. Repea...
James K. Hane, Richard P. Oliver
JUCS
2008
107views more  JUCS 2008»
13 years 8 months ago
Informatics for Historians: Tools for Medieval Document XML Markup, and their Impact on the History-Sciences
: This article is a revised and extended version of [VBG, 07]. We conjecture that the digitalization of historical text documents as a basis of data mining and information retrieva...
Benjamin Burkard, Georg Vogeler, Stefan Gruner
IPM
2007
84views more  IPM 2007»
13 years 8 months ago
Multi-candidate reduction: Sentence compression as a tool for document summarization tasks
This article examines the application of two single-document sentence compression techniques to the problem of multi-document summarization—a “parse-and-trim” approach and a...
David M. Zajic, Bonnie J. Dorr, Jimmy J. Lin, Rich...