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WABI
2005
Springer
118views Bioinformatics» more  WABI 2005»
14 years 27 days ago
A Hidden Markov Technique for Haplotype Reconstruction
We give a new algorithm for the genotype phasing problem. Our solution is based on a hidden Markov model for haplotypes. The model has a uniform structure, unlike most solutions pr...
Pasi Rastas, Mikko Koivisto, Heikki Mannila, Esko ...
WABI
2005
Springer
124views Bioinformatics» more  WABI 2005»
14 years 27 days ago
Reconstructing Metabolic Networks Using Interval Analysis
Recently, there has been growing interest in the modelling and simulation of biological systems. Such systems are often modelled in terms of coupled ordinary differential equation...
Warwick Tucker, Vincent Moulton
WABI
2005
Springer
110views Bioinformatics» more  WABI 2005»
14 years 27 days ago
Alignment of Tandem Repeats with Excision, Duplication, Substitution and Indels (EDSI)
Abstract. Traditional sequence comparison by alignment applies a mutation model comprising two events, substitutions and indels (insertions or deletions) of single positions (SI). ...
Michael Sammeth, Thomas Weniger, Dag Harmsen, Jens...
WABI
2005
Springer
14 years 27 days ago
Time-Window Analysis of Developmental Gene Expression Data with Multiple Genetic Backgrounds
d Abstract] Tamir Tuller , Efrat Oron , Erez Makavy , Daniel A. Chamovitz † , and Benny Chor ‡ Tel-Aviv University, Tel-Aviv 69978, Israel. Abstract. We study gene expression d...
Tamir Tuller, Efrat Oron, Erez Makavy, Daniel A. C...
WABI
2005
Springer
120views Bioinformatics» more  WABI 2005»
14 years 27 days ago
Multiple Structural RNA Alignment with Lagrangian Relaxation
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
Markus Bauer, Gunnar W. Klau, Knut Reinert