Sciweavers

DILS
2006
Springer
14 years 2 months ago
Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions
Linking the biomedical literature to other data resources is notoriously difficult and requires text mining. Text mining aims to automatically extract facts from literature. Since ...
Tobias Kuhn, Loïc Royer, Norbert E. Fuchs, Mi...
DILS
2006
Springer
14 years 2 months ago
A Method for Similarity-Based Grouping of Biological Data
Similarity-based grouping of data entries in one or more data sources is a task underlying many different data management tasks, such as, structuring search results, removal of red...
Vaida Jakoniene, David Rundqvist, Patrick Lambrix
DILS
2006
Springer
14 years 2 months ago
On Querying OBO Ontologies Using a DAG Pattern Query Language
The Open Biomedical Ontologies (OBO) is a consortium that serves as a repository of ontologies that are structured like directed acyclic graphs. In this paper we present a language...
Amarnath Gupta, Simone Santini
DILS
2006
Springer
14 years 2 months ago
An Extensible Light-Weight XML-Based Monitoring System for Sequence Databases
Life science researchers want biological information in their interest to become available to them as soon as possible. A monitoring system is a solution that relieves biologists f...
Dieter Van de Craen, Frank Neven, Kerstin Koch
DILS
2006
Springer
14 years 2 months ago
Towards a Model of Provenance and User Views in Scientific Workflows
Scientific experiments are becoming increasingly large and complex, with a commensurate increase in the amount and complexity of data generated. Data, both intermediate and final r...
Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davi...
DILS
2006
Springer
14 years 2 months ago
The Distributed Annotation System for Integration of Biological Data
The Distributed Annotation System (DAS) is a protocol for sharing of biological data which allows for dynamical data integration. It has become widely used in both the genome and p...
Andreas Prlic, Ewan Birney, Tony Cox, Thomas A. Do...
DILS
2006
Springer
14 years 2 months ago
On Characterising and Identifying Mismatches in Scientific Workflows
Abstract. Workflows are gaining importance as a means for modelling and enacting in silico scientific experiments. A major issue which arises when aggregating a collection of analy...
Khalid Belhajjame, Suzanne M. Embury, Norman W. Pa...
DILS
2006
Springer
14 years 2 months ago
A Cell-Cycle Knowledge Integration Framework
Erick Antezana, Elena Tsiporkova, Vladimir Mironov...
DILS
2004
Springer
14 years 2 months ago
Efficient Techniques to Explore and Rank Paths in Life Science Data Sources
Abstract. Life science data sources represent a complex link-driven federation of publicly available Web accessible sources. A fundamental need for scientists today is the ability ...
Zoé Lacroix, Louiqa Raschid, Maria-Esther V...