JCB
2007
13 years 11 months ago
2007
Accurate prediction of pseudoknotted nucleic acid secondary structure is an important computational challenge. Prediction algorithms based on dynamic programming aim to find a st...
BMCBI
2005
13 years 11 months ago
2005
Background: Detection of sequence homologues represents a challenging task that is important for the discovery of protein families and the reliable application of automatic annota...
TKDE
2008
13 years 11 months ago
2008
Semisupervised clustering algorithms partition a given data set using limited supervision from the user. The success of these algorithms depends on the type of supervision and also...
BMCBI
2005
13 years 11 months ago
2005
Background: The protein folding problem is a fundamental problems in computational molecular biology and biochemical physics. Various optimisation methods have been applied to for...
TJS
2008
13 years 11 months ago
2008
A parallel file may be physically stored on several independent disks and logically partitioned by several processors. This paper presents general algorithms for mapping between t...
TJS
2008
13 years 11 months ago
2008
Abstract Multiprocessor task scheduling is an important and computationally difficult problem. A large number of algorithms were proposed which represent various tradeoffs between ...
BMCBI
2005
13 years 11 months ago
2005
Background: The use of mass spectrometry as a proteomics tool is poised to revolutionize early disease diagnosis and biomarker identification. Unfortunately, before standard super...
JAR
2007
13 years 11 months ago
2007
Abstract. In this paper we study the diagnosis and repair of incoherent terminologies. We define a number of new non-standard reasoning services to explain incoherence through pin...
BMCBI
2005
13 years 11 months ago
2005
Background: Different classes of haplotype block algorithms exist and the ideal dataset to assess their performance would be to comprehensively re-sequence a large genomic region ...
BMCBI
2005
13 years 11 months ago
2005
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...