CIBCB
2007
IEEE
13 years 9 months ago
2007
IEEE
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
CIBCB
2007
IEEE
13 years 11 months ago
2007
IEEE
-- A large and reliable DNA codeword library is the key to the success of DNA based computing. Searching for the set of reliable DNA codewords is an NP-hard problem, which can take...
CIBCB
2007
IEEE
13 years 11 months ago
2007
IEEE
The accurate prediction of enzyme catalytic sites remains an open problem in bioinformatics. Recently, several structure-based methods have become popular; however, few robust seq...
CIBCB
2007
IEEE
13 years 11 months ago
2007
IEEE
Gene regulatory network model is the most widely used mechanism to model and predict the behavior of living organisms. Network Component Analysis (NCA) as an emerging issue for unc...
CIBCB
2007
IEEE
13 years 11 months ago
2007
IEEE
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
CIBCB
2007
IEEE
14 years 1 months ago
2007
IEEE
Abstract— We applied Support Vector Machines to the prediction of the subcellular localization of transmembrane proteins, and compared the performance of different sequence kerne...
CIBCB
2007
IEEE
14 years 1 months ago
2007
IEEE
Abstract— Multiple sequence alignment is an important problem in computational biology. A-star is an algorithm that can be used to find exact alignments. We present a simple mod...
CIBCB
2007
IEEE
14 years 1 months ago
2007
IEEE
The susceptible, infected, removed model for epidemics assumes that the population in which the epidemic takes place is well mixed. This strong assumption can be relaxed by permit...
CIBCB
2007
IEEE
14 years 1 months ago
2007
IEEE
—DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of...
CIBCB
2007
IEEE
14 years 1 months ago
2007
IEEE
Abstract— This paper presents a parametric model to estimate the DNA-protein binding time using the DNA and protein structures and details of the binding site. To understand the ...