Computational Biology

38

RECOMB
1998
Springer

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On reconstructing species trees from gene trees in term of duplications and losses

14 years 4 months ago

This paper studies various properties of the least common ancestors mapping, the duplication and mutation costs, and the complexity of nding a species tree from gene trees.

Bin Ma, Ming Li, Louxin Zhang

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35

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RECOMB
1998
Springer

120views Computational Biology» more RECOMB 1998»

A polyhedral approach to RNA sequence structure alignment

14 years 4 months ago

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Ribonucleic acid (RNA) is a polymer composed of four bases denoted A, C, G, and U. It is a generally single-stranded molecule where the bases form hydrogen bonds within the same m...

Hans-Peter Lenhof, Knut Reinert, Martin Vingron

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26

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RECOMB
1998
Springer

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Optimal detection of sequence similarity by local alignment

14 years 4 months ago

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Terence Hwa, Michael Lässig

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30

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RECOMB
1998
Springer

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Dynamic programming alignment accuracy

14 years 4 months ago

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Ian Holmes, Richard Durbin

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28

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RECOMB
1998
Springer

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Family-based homology detection via pairwise sequence comparison

14 years 4 months ago

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William Noble Grundy

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31

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RECOMB
1998
Springer

106views Computational Biology» more RECOMB 1998»

The hierarchical organization of molecular structure computations

14 years 4 months ago

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The task of computing molecular structure from combinations of experimental and theoretical constraints is expensive because of the large number of estimated parameters (the 3D co...

Cheng Che Chen, Jaswinder Pal Singh, Russ B. Altma...

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29

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ASM
1998
ASM

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Interacting Abstract State Machines

14 years 4 months ago

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Marcelo de Almeida Maia, Vladimir Oliveira Di Iori...

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42

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ASM
1998
ASM

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Modeling Cache Coherence Protocol - A Case Study with FLASH

14 years 4 months ago

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This paper is devoted to the speci cation of the Stanford FLASHcache coherence protocol within the ASM formalism. Correctness proofs related to data consistency are presented. Corn...

Arnaud Durand

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30

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ASM
1998
ASM

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A Realistic Environment for Crypto-Protocol Analyses by ASMs

14 years 4 months ago

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Giampaolo Bella, Elvinia Riccobene

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