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JCAMD
2010
92views more  JCAMD 2010»
13 years 6 months ago
Ligand docking and binding site analysis with PyMOL and Autodock/Vina
Docking of small molecule compounds into the binding site of a receptor and estimating the binding affinity of the complex is an important part of the structurebased drug design pr...
Daniel Seeliger, Bert L. de Groot
ML
1998
ACM
115views Machine Learning» more  ML 1998»
13 years 11 months ago
Pharmacophore Discovery Using the Inductive Logic Programming System PROGOL
This paper is a case study of a machine aided knowledge discovery process within the general area of drug design. More speci cally, the paper describes a sequence of experiments in...
Paul W. Finn, Stephen Muggleton, David Page, Ashwi...
ALGORITHMICA
1999
84views more  ALGORITHMICA 1999»
13 years 11 months ago
Computational Approaches to Drug Design
Abstract. The rational approach to pharmaceutical drug design begins with an investigation of the relationship between chemical structure and biological activity. Information gaine...
Paul W. Finn, Lydia E. Kavraki
JCC
2008
66views more  JCC 2008»
13 years 11 months ago
Multiple field three dimensional quantitative structure-activity relationship (MF-3D-QSAR)
Abstract: A new drug design method, the multiple field three-dimensional quantitative structure
Qishi Du, Ri-Bo Huang, Yu-Tuo Wei, Li-Qin Du, Kuo-...
BMCBI
2006
135views more  BMCBI 2006»
13 years 11 months ago
Correcting ligands, metabolites, and pathways
Background: A wide range of research areas in bioinformatics, molecular biology and medicinal chemistry require precise chemical structure information about molecules and reaction...
Martin A. Ott, Gert Vriend