NAR
2008
14 years 2 months ago
2008
Many Microbe Microarrays Database (M3D ) is designed to facilitate the analysis and visualization of expression data in compendia compiled from multiple laboratories. M3D contains...
BMCBI
2006
14 years 2 months ago
2006
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
BMCBI
2006
14 years 2 months ago
2006
Background: Modeling of gene expression data from time course experiments often involves the use of linear models such as those obtained from principal component analysis (PCA), i...
BMCBI
2006
14 years 2 months ago
2006
Background: The learning of global genetic regulatory networks from expression data is a severely under-constrained problem that is aided by reducing the dimensionality of the sea...
BMCBI
2006
14 years 2 months ago
2006
Background: Clustering of gene expression patterns is a well-studied technique for elucidating trends across large numbers of transcripts and for identifying likely co-regulated g...
BMCBI
2006
14 years 2 months ago
2006
Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
BMCBI
2006
14 years 2 months ago
2006
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
BMCBI
2006
14 years 2 months ago
2006
Background: Microarray technology is generating huge amounts of data about the expression level of thousands of genes, or even whole genomes, across different experimental conditi...
BMCBI
2006
14 years 2 months ago
2006
Background: The development of algorithms to infer the structure of gene regulatory networks based on expression data is an important subject in bioinformatics research. Validatio...
BMCBI
2006
14 years 2 months ago
2006
Background: Simulation of DNA-microarray data serves at least three purposes: (i) optimizing the design of an intended DNA microarray experiment, (ii) comparing existing pre-proce...